BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029D09LP1|AL429059
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig814 944 0.0
>3x_Contig814
Length = 3416
Score = 944 bits (476), Expect = 0.0
Identities = 487/490 (99%), Gaps = 1/490 (0%)
Strand = Plus / Minus
Query: 419 agattaaggctaacatggctatagagctccccaacagaagcagattctcagatgtttaca 478
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3408 agattaaggctaacttggctatagagctccccaacagaagcagattctcagatgtttaca 3349
Query: 479 tagctgtagagcttatcacagcatttagggtgggtagaattgcaaaccgacccaattaat 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3348 tagctgtagagcttatcacagcatttagggtgggtagaattgcaaaccgacccaattaat 3289
Query: 539 ataatgtcacttaacgattttttggcgaagtcttacggctcaaagcacggtaaagagaag 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3288 ataatgtcacttaacgattttttggcgaagtcttacggctcaaagcacggtaaagagaag 3229
Query: 599 acgaaaaagtctaaggataagtcatcacacagaaagagcgatgagtctaaaagagtcaca 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3228 acgaaaaagtctaaggataagtcatcacacagaaagagcgatgagtctaaaagagtcaca 3169
Query: 659 tcaagaaatattgatattattgacaaggctaatcttattactgaagaaaacaagaaggct 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3168 tcaagaaatattgatattattgacaaggctaatcttattactgaagaaaacaagaaggct 3109
Query: 719 gcaa-ctcaaataaaacaggaaagtctctttggaaaaaccttgaaactgaaaagttggaa 777
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3108 gcaagctcaaataaaacaggaaagtctctttggaaaaaccttgaaactgaaaagttggaa 3049
Query: 778 cttgtacaacacgttgatgtcgacaaaaaggacgatagtwaggaaaggatgtcgtcaggc 837
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 3048 cttgtacaacacgttgatgtcgacaaaaaggacgatagtaaggaaaggatgtcgtcaggc 2989
Query: 838 gcctttgctgggttacagacagcagaagagatggaaaagcagatcgcagaaaaggaaaaa 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2988 gcctttgctgggttacagacagcagaagagatggaaaagcagatcgcagaaaaggaaaaa 2929
Query: 898 ctttctatgc 907
||||||||||
Sbjct: 2928 ctttctatgc 2919
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7179
Number of Sequences: 1807
Number of extensions: 7179
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)